Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVYLRKIDNQILHNKRISIKKGILEHFFDKANNQDEVDMSGILSNYNDKVSILLATDPRLGGGIKRIISAEVDKIKENRLDYELKIDDILLFTYISYKKYTLEIILLADTRYNVLNGLINNSKHLLVFSENETRTLDDGKINESVRIDGGKNIILYGVPGSGKSYTLQRDYCNNSVVEKIVFHPDYSYSDFVGQIMPSVDDSGIVSYKFNPGPFTNILKKAYHNPQTKHVLVIDEINRGNVPAIFGEIFQLLDRLKHDKDGFKKGSSEYAINNTDIANIVHNDKNASIRIPSNLWIVATMNTSDQNVFTLDTAFQRRFSMQLVENSFENVDDDFKNMKILDTDMTWQKFCTTINEKIAQNNEGLSSMEDKRFGVYFVSIDDLKSKENFAHKVIKYLWDDVFKFDRNIIFNTTKFNTLEAVVKNFIKEKDRTQFDVFSDDIKELLFNV |
| 3WHK Chain:F ((7-65)) | -------------------------------------------------------------------------------------------------------EVVERPNVTYNDIGGL---KKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVREGARLVHELFELAKEKAPTIIFIDEIDAIGAKEVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDEFSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQAR----------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WHK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2415 for 255 contacts (9.5/contact) +
2D Compatibility (PS) -6299 + (NN) -1895 + (LL) 12412
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: 1983.0 ( 7.78 by residue)
QMean score : 0.072
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