Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVVLGSTGSIGKNALKIAKKF--GVKIEALSCGKNIALINEQIKVFKPKKVAILDPNDLNNL-EPLGAEVFVGLDGIDAMIEECV--SNLVINAIVGVAGLKASFKSLQRNKKLALANKESLVSAGHLL------DISQITPVDSEHFGLWALLQNKTLK-PKSLIISASGGAFRDTPLDLIAIQNAQNALKHPNWSMGDKITIDSASMVNKLFEILETYWLFGASL-KIDALIERSSIVHALVEFEDNSVIAHLASADMQLPISYAIN-PKLASLSASIKPLDLYALSAIKFEPISVERYTLWRYKDLLLENPKLG----VVLNASNEVAMKKFLNQEIAFGGFIQIISQALELYAKKSFKLSSLDEVLALDKEVRERFGSVARV |
1R0K Chain:B ((7-376)) | VTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAVQHP--SMGAKISIDSATMMNKGLELIEAFHLFQIPLEKFEILVHPQSVIHSMVEYLDGSILAQIGSPDMRTPIGHTLAWPK--RMETPAESLDFTKLRQMDFEAPDYERFPAL---TLAMESIKSGGARPAVMNAANEIAVAAFLDKKIGFLDIAKIVEKTLDHYTPAT--PSSLEDVFAIDNEARIQAAALMES |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218501 for 3005 contacts (-72.7/contact) +
2D Compatibility (PS) -36733 + (NN) -6676 + (LL) 848
1D Compatibility (HY) -26000 + (ID) 6600
Total energy: -293662.0 ( -97.72 by residue)
QMean score : 0.455
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