Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDYS-ELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALLETFIE--------------------KEDLEERFESFAKALR--------------MDEELQQKIESRKTDIVI------QSMANILSGNE-------
1Q77 Chain:A ((1-138))
--SNAMKVLLVLTDAYSDCEKAITYAVNFSEKLGAE--LDILAVLEDVYNLERANVTFGLPFPPEIKEESKKRIERRLREVWEKLTGSTEIPGVEYRIGPLSEEVKKFVEGKGYELVVWACYPSAYLCKVIDGLNLASLIVK
General information:
TITO was launched using:
RESULT:
Template:
1Q77.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14030 for 565 contacts (-24.8/contact) +
2D Compatibility (PS) -9893 + (NN) -6312 + (LL) 584
1D Compatibility (HY) -8400 + (ID) 900
Total energy: -38951.0 ( -68.94 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_1Q77.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q77-query.scw
PDB file :
Tito_Scwrl_1Q77.pdb
: