Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLNRIIEHMNAHHVEDMKGLLKKFGQVHHAENVAFKSVDPQGIVIGYNNNQTLRIEFNHEVKDPKDYKNAIIELCQSVEKTHDLKGVEEEVKAFRKDFDSVCLATLHPNGHVVCSYAPLMTD-GKQYYIYVSEVAEHFAGLKNNPHNVEVMFLEDESKAKSAILRKRLRYKTNARFIERG-AEFDKAFDSFIEKTGGAGGIKTIRTMQDFHLIALDFKEGRFVKGFGQAYDILGDKIAYVGDKGNPHNFAHKK |
1VL7 Chain:A ((23-157)) | ------------------------------------------------------------------------------------------YAGFIQEFQSAIISTISEQGIPNGSYAPFVIDDAKNIYIYVSGLAVHTKNIEANP-LVNVLFVDDEAKTNQIFARRRLSFDCTATLIERESQKWNQVVDQFQERFGQ--IIEVLRGLADFRIFQLTPKEGRFVIGFGA------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VL7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75257 for 933 contacts (-80.7/contact) +
2D Compatibility (PS) -14589 + (NN) -3316 + (LL) 7188
1D Compatibility (HY) -12400 + (ID) 2550
Total energy: -100924.0 ( -108.17 by residue)
QMean score : 0.539
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