Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MALPVYYDKDIDLGVIQSLQVGIIGYGVQGEAQALNLRDSKVKVRIGLYQ-----GSLSVSKAKKEGFEVLGVKELVQQSDVIMALLPDELHKEVLEKEVIPFLKEGQIIGFAHGFSVHFNQVVLPKGVGAILVAPKGPGSALREEYLKNRGLYHLIAIEQESSIHNAKAVALSYAKAMGGGRMGVLETSFKEECESDLFGEQAVLCGGLEAIVRMGFETLIKAGYPEELAYFECVHEVKLVADLLHYKGVEGLRKHISNTAEFGAIK-AREPMGNLLEKRMQKILKKIQNGAFAKDFLLEKSLNYPRLNTERKALKETKIEQIGEILRAPFNHKK |
4XDY Chain:B ((1-331)) | --MEILHDEDVDDSILRDKTIAVMGYGAQGDAQANCLKDSGINVVIGETEILGGNKNPSWEKAKEDGFEVLPIDKAAEKGDVVHILLPDEVQPAIYENQIKPQLKAGKALCFSHGFNICFKRIVPPEDVDVIMVAPKAPGTEERKAYLEGFGVPGLVAVKQNPS-GEAREVALAMTKAMHWTKAGILECTFEQETYEDLFGEQCVLCGGLVELMRNGFEVLVEAGYPPEMAYFECVHEMKLIVDLVWQGGIKRMAEVISNTAEYGMWAVGHQIIGPEVKEKMKEALKRVENGEFANEWVDEYKRGIPFLKASREKMGEHQVETVGAEIRKLFAQ-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -165107 for 2526 contacts (-65.4/contact) +
2D Compatibility (PS) -36026 + (NN) -20154 + (LL) 684
1D Compatibility (HY) -27200 + (ID) 6600
Total energy: -254403.0 ( -100.71 by residue)
QMean score : 0.528
|
|
|