Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRLETLESILERLRMSIKKNGLKNSKQREEVVSVLYRSGTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENFICVLETSKSGRRYEIAAKEHHDHIICLHCGKIIEFADPEIEHRQNEVVKKYQAKLISHDMKMF-VWCKECQESDD
4RAZ Chain:B ((3-136))
---------MVSRIEQRLIDKGLKVTDQRRVIAQVLSDSADHPDVEEVYRRATAKDPRISIATVYRTVRLFEEESILERHDFGDGRARYEEAPSEHHDHLIDVNSARVIEFTSPEIEALQREIARKHGFRLVGHRLELYGVPL--------
General information:
TITO was launched using:
RESULT:
Template:
4RAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45186 for 874 contacts (-51.7/contact) +
2D Compatibility (PS) -13965 + (NN) 1407 + (LL) 1260
1D Compatibility (HY) -7200 + (ID) 2200
Total energy: -65884.0 ( -75.38 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_4RAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RAZ-query.scw
PDB file :
Tito_Scwrl_4RAZ.pdb
: