Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNAFKAFALLIVFFSNALLAQDLKIAAAANLTRALKALVKEFQKE---HPKDAINISFNSSGKLYAQ---IAQNAPFDLFISADIARPKKLYDEKITPFKEEVYAKGVLVL-WSEN--L------KMDSLEILKDPKIK-RIAMANPKLAPYGKASMEVLDR----LK--LTPSLK-----------------------SKIIYGASISQAHQFIATKNAQIGFGALSLIDKKDKNLSYFIIDKT----------------------L----YNPIEQALIITKNGANNPLAKVFKDFLFSPKARAIFKEYGYIVD |
| 3CG1 Chain:A ((4-296)) | --------------------EVTLIVFHAGSLSVPFQEVEKEFSEYAERNLGIKVSFQDEASGSVMAVRKVTDLGRKADVIGVADYTLIPQLLIPNYTD-FYVLFATNEIVIAFTDKSRYVEEMKSNPDKWYEILAR-EDVRFGFSDPNQDPCGYRSLMVIKLADLYYGKEIFKELIEENTNIYSNGTQIYAPKEITVNPGKIVIRPKETDLLGLVESGSIDYIFIYKSVAKQ--HNLSYITLPSEINLGDFSKEKFYGQISITLGSTGKTIKAKPIVYGVTVLKDAPNREVAIEFLRYLLSENGKRIFEKNHQDFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104308 for 1834 contacts (-56.9/contact) +
2D Compatibility (PS) -24078 + (NN) -9912 + (LL) 2536
1D Compatibility (HY) -14400 + (ID) 2100
Total energy: -152262.0 ( -83.02 by residue)
QMean score : 0.488
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