Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQSLREQKLLKILENDVLTILDSFSNYLFELREELDFIEEEMEGEITEQNLTALYDFSN-FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQDPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIRQSYRILRLLEKPINNNISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQIDMSVEAKKKELFEKYFQNIDEVTNKMLDQENQNKNSD |
| 1UDD Chain:A ((1-215)) | -----MRVMITDKLRRDSEQIWKKIFEH--------PFVVQLYSGTLPLEKFKFYVLQDFNYLVGLTRALAVISSKAEYPLMAELIELARDEVTVEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATAYKGNIIEGLTALLPCFWSYAEIAEYHKDKLRDNPI--KIYREWGKVYLSNEYLNLVGRLRKIID------------------------------------SSGHSGYDRLRRIFITGSKFELAFWEMAWRGG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UDD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18818 for 1665 contacts (-11.3/contact) +
2D Compatibility (PS) -22637 + (NN) -8504 + (LL) 4748
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -51311.0 ( -30.82 by residue)
QMean score : 0.420
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