Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLKRAKTKAQQIKELLLKHYPNQTTELRH---KNPYELLVATILSAQCTDARVNQITPKLFEKYPSVNDLALASLEEVKEIIQSVSYSNNKSKHLISMGAKVVKDFKGVIPSTQKELMSLDGVGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSNA-----NTPIKTEEELSDLF-KDNLSKLHHALILFGRYTCKAKNPLCDACFLKEFCVSKASFKA
3FSP Chain:A ((11-222))
-------FPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYS-RVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVDGNVMRVLSRLFLVTDDIAKPSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVA
General information:
TITO was launched using:
RESULT:
Template:
3FSP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105294 for 1605 contacts (-65.6/contact) +
2D Compatibility (PS) -21361 + (NN) -9747 + (LL) 648
1D Compatibility (HY) -12800 + (ID) 2500
Total energy: -151054.0 ( -94.11 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_3FSP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FSP-query.scw
PDB file :
Tito_Scwrl_3FSP.pdb
: