Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKKIVVDPITRIEGHLRIEVIVDDDNVITDAFSSSTLFRGLETIIKGRDPRDAGFIAQRICGVCTYSHYKAGVTAVENALGITPPLNAQLVRSLMNMALLFHDHVVHFYTLHGLDWCDILSTLKADPIQAAKLSFKYSPYPINTGAGELKAVQKRLNDFAKSGSLGPFSNGYYGHKTYRLNPEQNLIVLSHYLKLLEIQREAAKMTAIFGAKQPHPQSLTVGGVTSVMDI------LDPTRLAEWKSKFEVVANFINHAYYPDLVMAGEMFANEPSVIKGCGLR-----NFIAYEEVLLGKDKYLLSSGVVLDGDISKLHPI---DESLIKEEVTHSWYQYEDTKEVQLHPYDGQTNPHYTGLKDGESVGIENKIIPAKVLDTKDKYSWIKSPRYDSKPMEVGPLSSVVVGLA---AKNPYVTEVATKF----------------LKDTKLPLEALF-STLGRTAARCIEAKTIADNGLLAFDALVENLKSDQSTCAPYHIDK----NQEYKGRYIGQV--PRGMLSHWVRIKNGVVENYQAVVPSTWNAGPRDSKNQRGAYEMSLIGTKIADLTQPLEIIRTIHSFDPCIACSVHVMDFKGQSLNEFKVEPNFAKF |
4TTT Chain:L ((16-603)) | --RRIVVDPVTRIEGHMRCEVNVDANNVIRNAVSTGTMWRGLEVILKGRDPRDAWAFVERICGVCTGCHALASVRAVENALDIRIPKNAHLIREIMAKTLQVHDHAVHFYHLHALDWVDVMSALKADPKRTSELQQLVSPAHPLSSAGYFRDIQNRLKRFVESGQLGPFMNGYWGSKAYVLPPEANLMAVTHYLEALDLQKEWVKIHTIFGGKNPHPNYL-VGGVPCAINLDAASAPVNMERLSFVKARIDEIIEFNKNVYVPDVLAIGTLY-KQAGWLYGGGLAATNVLDYGEYPNVAYNKSTDQLPGGAILNGNWDEVFPVDPRDSQQVQEFVSHSWYKYAD-ESVGLHPWDGVTEPNY--VLGANTKGTRTRI---EQIDESAKYSWIKSPRWRGHAMEVGPLSRYILAYAHARSGNKYAERPKEQLEYSAQMINSAIPKALGLPETQYTLKQLLPSTIGRTLARALESQYCGEMMHSDWHDLVANIRAGDTATA--NVDKWDPATWPLQAKGVGTVAAPRGALGHWIRIKDGRIENYQCVVPTTWNGSPRDYKGQIGAFEASLMNTPMVNPEQPVEILRTLHSFDPCLACSTH--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TTT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233170 for 4889 contacts (-47.7/contact) +
2D Compatibility (PS) -57631 + (NN) -19049 + (LL) 1852
1D Compatibility (HY) -46400 + (ID) 12450
Total energy: -366848.0 ( -75.04 by residue)
QMean score : 0.462
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