Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTMNAIRWPKKWIPGETDNFVSNEVIVKGLDFNKVVQHLRDASHWEKYYKN-SGNIHMYHQDNTILKDKTRFCFETFGFLVEAEVEEFELKDAILRLAWRGWNEAKGDEYLEVYHAWLVEKLDNDRVRILTQESQSGVPAKALAKSVPNAMLNGHQAWL-DGLVAYSR |
| 3NI8 Chain:A ((18-153)) | ------------------GMSFEITE-EYYVPPEVLFNAFTDAYTLTRLSRGSLA--------EVDLKVGGKFSLFSG--SILGEFTEITK---PHKIVEKWKFRDWN-ECDYSTVTVEFISVKENHTKLKLTHNNIPASNKYNEGGVLERCKNGWTQNFLHNIEVILG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NI8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29980 for 945 contacts (-31.7/contact) +
2D Compatibility (PS) -14084 + (NN) -46 + (LL) 2012
1D Compatibility (HY) 400 + (ID) 600
Total energy: -42298.0 ( -44.76 by residue)
QMean score : 0.235
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