Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDREQIIALQHQRFATKKYDPNRRISEKDWEVLVEVGRLAPSSIGLEPWKMLLLKNERMKEDLKPMAWGGLSSLEGASHFVIYLARKGVTYDSDYVKKVMH--EVKKRDY---DTHSRFAQIIKNFQENDIKLNSERSLFDWASKQTYIQMANMMMAAAMLGIDSCPIEGYDQEKVEAYLEEKGYLNTAEFGVSVMASFGYRNQEITPKTRWKTEVIYEVIE |
1NOX Chain:A ((7-205)) | --VLDAKTAALKRRSIRRYRK-DPVPEGLLREILEAALRAPSAWNLQPWRIVVVRDPATKRALREAAFGQA-HVEEAPVVLVLYADLE-----DALAHLDEVIHPGVQGERREAQKQAIQRAF--------AAMGQEARKAWASGQSYILLGYLLLLLEAYGLGSVPMLGFDPERVRAILGL----P-SRAAIPALVALGYPAEEGYPSHRLPLERVVLWR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58481 for 1373 contacts (-42.6/contact) +
2D Compatibility (PS) -20837 + (NN) -6983 + (LL) 960
1D Compatibility (HY) -9200 + (ID) 1950
Total energy: -96491.0 ( -70.28 by residue)
QMean score : 0.601
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