Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPYSSKVQSLSESATIAISTLAKELKSQGKDILSFSAGEPDFDTPQAIKDAAIKALNDGFTKYTPVAGIPELLKAIAFKLKKENNLDYEPSEILVSNGAKQSLFNAIQALIGEGDEVVIPVPFWVTYPELVKYSGGVSQFIQTDEKSHFKITPKQLKDALSPKTKMLILTTPSNPTGMLYSKAELEALGEVLKDTKVWVLSDEIYEKLVYKGEFVSCAAVSEEMKKRTITINGLSKSVAMTGWRMGYAASKDKKLVKLMSNLQSQCTSNINSITQMASIVALEGLVDKE-----IETMRQAFEKRCHLAHAKINAIEGLNALKPDGAFYLFINIGSLCGGDSMRFCHELLEKEGVALVPGKAFGLEGYVRLSFACSEEQIEKGIERIARFVKSKG
1GCK Chain:B ((5-382))---SRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPE---HTLTVNGAAKAFAMTGWRIGYACGP-KEVIKAMASVSRQSTTSPDTIAQWAT---LEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAVRPSGAFYVLMDTSPIA-PDEVRAAERLLEA-GVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVL----


General information:
TITO was launched using:
RESULT:

Template: 1GCK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -204489 for 3319 contacts (-61.6/contact) +
2D Compatibility (PS) -41394 + (NN) -28415 + (LL) 924
1D Compatibility (HY) -29200 + (ID) 8300
Total energy: -310874.0 ( -93.66 by residue)
QMean score : 0.577

(partial model without unconserved sides chains):
PDB file : Tito_1GCK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GCK-query.scw
PDB file : Tito_Scwrl_1GCK.pdb: