Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSVIILAAGKGTRMHSSLPKTLHTICGEPMLFYILEVAFSISNDVHL-VLHHQQERIKEAVSKRFKGVIFHAQIVEKYSGTGGAIMQENKTPI-PTQHERVLILNADMPLITKDALTPLLE---SHNNAIGLL--HLADPKGYGRVIL-ENHQVKKIVEEKDANDEEKTIKSVNAGVYFFERKFLERYLPKLHDQNAQKEYYLTDLIALGIKGNEKIDAIFLEE-ECFLGVNSQTERAKAEEIMLERLRKNAMDLGVVMQLPSSIYL------------EKGVSFKG------ECVLEQGVRLIGNCLIENARIKAYSVIEESQIINS-SVGPFAHARPKSVI-CDSHVGNFVETKNAKL-QGTKAGHLSYLGDCEIGKNTNVGAGVITCNYDGKKKHQTIIGENVFIGSDSQLVAPINIGSNVLIGSGTTITKDIPSGSLSLSRTPQTNIENGYFKFFKKP |
| 4AAW Chain:A ((6-444)) | ----IILAAGKGTRMKSDLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAEQTEFVTQSEQL-----GTGHAVMMTE--PILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETDNPFGYGRIVRNDNAEVLRIVEQKDATDFEKQIKEINTGTYVFDNERLFEALKNINTNN---EYYITDVIGIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQIEANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVI-TNSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGENTKAGHLTYIGNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTIIAPVELGDNSLVGAGSTITKDVPADAIAIGRGRQINKDEYATRLPHHP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AAW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -289095 for 3274 contacts (-88.3/contact) +
2D Compatibility (PS) -44775 + (NN) -11727 + (LL) 1480
1D Compatibility (HY) -28400 + (ID) 8650
Total energy: -381167.0 ( -116.42 by residue)
QMean score : 0.543
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