Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFKNKKWLFLAPLAGYTDLPFRSVVKKFGVDV-TTSEMVSSHSLVYAFDKTSKMLEKSPLEDHFMAQISGSKESVVKEAVEKINALDHVSGIDFNCGCPAPKVANHGNGSGLLKDLNHLVEILKVIRENTNKKITSVKVRLGFEKK----IPKEIAHALNDAPVDYVVVHGRTRSDRYQK-DKIDYESIALMKKIL-KKPVIANGEIDSVKKAFEVLQITQADGLMIGRATLRAPWIFWQIRNNTTE----LPAVVKKDLVLEHFDKMVEFYGDRGVIMFRKNLHAYAKGEMQASAFRNCVNTLTEIKSMRESIEEFFNQEMLQSEVPLWVELNQKSV |
| 3B0P Chain:A ((2-318)) | ----LDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRE--RLLAFRPEEHPIALQLAGSDPKSLAEAARIG-EAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVP-VTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSAL-----IPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK--RVDGVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEEEVLKG--TPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEEVGE--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122251 for 2526 contacts (-48.4/contact) +
2D Compatibility (PS) -31410 + (NN) -14771 + (LL) 2104
1D Compatibility (HY) -13200 + (ID) 3350
Total energy: -182878.0 ( -72.40 by residue)
QMean score : 0.387
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