Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEFCVLFGGASFEHEISIVSAIALKGVLKDRIKYFIFLDENHYFYLIEESNMHSKYFAQIKEKKLPPLILTHNGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRVEASVLSYNKYLTKLYAKDLGVKALDYVLLNEKNRANALDLIGFNFPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFEYSKEVLIEPFIQGVKEYNLAGCKIK-KGFCFSYVEEPNK-QEFLDFKQKYLDFSRTK-APKANLSNALEEQLKENFKKLYNDLFDGAIIRCDFFVIENEVYLNEINPIPGSLANYLF--------DDFKTTLENLAQ-SLPKTPKIQVKNSYLLQIQKNK |
| 2FB9 Chain:A ((4-321)) | MRVLLIAGGVSPEHEVSLLSAEGVLRHIPF-PTDLAVIAQDGRWLLGEKALTALEAKA-------APEGE-----H-PFPPPLSWERYDVVFPLLHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKRVLAQAGVPVVPWVAVRKGEPPV----VPFDPPFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFGEA--SPVGEVRYEAPFYDYETKYTPG-RAELLIPAPLDPGTQETVQELALKAYKVLGVRGMARVDFFLAEGELYLNELNTIPGFTPTSMYPRLFEAGGVAYPELLRRLVELALT------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -171310 for 2494 contacts (-68.7/contact) +
2D Compatibility (PS) -33252 + (NN) -11222 + (LL) 2804
1D Compatibility (HY) -16000 + (ID) 4400
Total energy: -233380.0 ( -93.58 by residue)
QMean score : 0.407
|
|
|