Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTVIFVAVLQAALGMLSVRQEICRNPSQPHDFKSLVIVTNFY
1SYQ Chain:B ((1-25))
-------PLLQAAKGLAGAVSELLRSAQPASA-----------
General information:
TITO was launched using:
RESULT:
Template:
1SYQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2515 for 87 contacts (-28.9/contact) +
2D Compatibility (PS) -2861 + (NN) -4392 + (LL) 2240
1D Compatibility (HY) -800 + (ID) 350
Total energy: -8678.0 ( -99.75 by residue)
QMean score : 0.103
(partial model without unconserved sides chains):
PDB file :
Tito_1SYQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SYQ-query.scw
PDB file :
Tito_Scwrl_1SYQ.pdb
: