Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMRFLNNKHREKGLKAEEEACGFLKTLGFEMIERNFFS----QFGEIDIIALKKGVLHFIEVKSGENFDPIYAITPSKLKKMIKTIRCYLSQKDPNSDFCIDALIVKNGKFELLENITF
1Y88 Chain:A ((16-68))----------NLYFQGHMVARLLEEHGFETK-TNVIVQGNCVEQEIDVVAERDGERYMIECKFHNIPVYTGLKEAMYTYARFLDVEKHGFTQPWIFTNTKFSEEAKKYAGCVGIKLTG


General information:
TITO was launched using:
RESULT:

Template: 1Y88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -19791 for 294 contacts (-67.3/contact) +
2D Compatibility (PS) -5534 + (NN) -1607 + (LL) 872
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -28310.0 ( -96.29 by residue)
QMean score : 0.483

(partial model without unconserved sides chains):
PDB file : Tito_1Y88.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y88-query.scw
PDB file : Tito_Scwrl_1Y88.pdb: