Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNHQNMLDNQTILITGGTGSFGKRFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNEISQVIALSTDKAANPINLYGATKLCSDKLFVSANNFKGPSQTQFGVVRYGNVVGSRGSVVPFFKKLVQNKASE-IPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMIDLAKAL----APNIPTKIIGIRPGEKLHEVMIPKDESHLALEFEDFFIIQPTISFQTPKDYTLTKLHEKG-QKVAPDFEYSSHTNNQWLEPDDLLKLL |
| 3W1V Chain:B ((23-330)) | -------FDDKILLITGGTGSFGNAVMKRFLDS-NIKEIRIFSRDEKKQDDIRKKYNNSKLKFYIGDVRDSQSVETAMRDVDYVFHAAALKQVPSCEFFPVEAVKTNIIGTENVLQSAIHQNVKKVICLSTDKAAYPINAMGISKAMMEKVFVAKSRNIRSEQTLICGTRYGNVMASRGSVIPLFIDKI--KAGEPLTITDPDMTRFLMSLEDAVELVVHAFKHAETGDIMVQKAPSSTVGDLATALLELFEADNAIEIIGTRHGEKKAETLLTREEYAQCEDMGDYFRV-PADS----RDLNYSNYVETGNEKITQSYEYNSDNTHILTVEEIKEKLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157734 for 2478 contacts (-63.7/contact) +
2D Compatibility (PS) -32631 + (NN) -14093 + (LL) 656
1D Compatibility (HY) -23600 + (ID) 6350
Total energy: -233752.0 ( -94.33 by residue)
QMean score : 0.486
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