Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------MLEALNALNQLNALHSKNAAHHFNATLPI----LLKVLEKQDKDL---FLLQVGNRIIPTKSEQELKIN--QPYFAIMQRNQLGDIVLKNL--------VPAPKILDALDDLPVIEMKKLKEILSAKDNTPL------KEYKELLSEKLIHAKSSQEFLNTANMLLSLQSQVLSFVVENERKKAFLQMKAKKQSVDFYALYPNLGEIGGVIYLKEKEKQLFLKTTLQRTKEVLKEAQNTLLGFSFVEIVCEKTPMLFA------FEDRLLDTLG----------------------------------------------------- |
| 3HGU Chain:A ((2-354)) | KDYSLEIDAVMKAAQINDTNNFVQALMRWHFSKETGSPFWLGMREQLNFDPIKDVKTINDLRQFSDISHCLRQEPVANLVPQGLPADSHPQVYESGGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFFSIDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTT--PPVLRELLKRPEVVLQMKQSLAQITLGGT-ELNLDEIKFIASEILPDCEFSASYGSTSALGVSRSLLITSESQQVIYDSFSPFITYDVVDSITAQTVEYGERGNVIVTHLSPWAFYPRVAERDTAIRLPGVSGFAGDRLADIEPLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HGU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5278 for 1675 contacts (-3.2/contact) +
2D Compatibility (PS) -25220 + (NN) -2595 + (LL) 408
1D Compatibility (HY) -2000 + (ID) 1600
Total energy: -36285.0 ( -21.66 by residue)
QMean score : 0.248
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