Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIKIQKIHPNALIPKYQTEGSSGFDLHAVEEVVIKPHSVGLVRIGICLSLEVGYELQVRTRSGLALNHQVMVLNSPGTVDNDYRGEIKVILANLSDKDFKVQVGDRIAQGVVQKTYKAEFIECEQLDETSRGSGGFGSTGVSKA
4OOP Chain:B ((29-166))
--FKVKKLSEKAVIPTRGSPLSAGYDLSSAVDSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDV--GAGVIDADYRGPVGVILFNHSDADFEVKFGDRIAQLIIEKIVTPDVVEVDDLDETVRGDGGFGSTGV---
General information:
TITO was launched using:
RESULT:
Template:
4OOP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74708 for 901 contacts (-82.9/contact) +
2D Compatibility (PS) -14882 + (NN) -3874 + (LL) 548
1D Compatibility (HY) -10000 + (ID) 2750
Total energy: -105666.0 ( -117.28 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_4OOP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OOP-query.scw
PDB file :
Tito_Scwrl_4OOP.pdb
: