Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MPSPVNPIHTNANALN-SGAKNEVKDAKNAPKSASKDFSKILNQKISKDKTAPKESPNHSALKATPKDAKEDAKALEKTPTLPHQHAQNLAKDQQAPTLKDWLNHPKTHPTAPHEAQHETHEANETNPKTPNETLSKNEKKPNEVASNAHQTNLPNKNPITPNHANNAIKNPTTPTHNVKDPKTLKDIQTLSQKHDLNASNIQAATTPENKNPLNASDHLALKTTQASINHTLTKNDAKNTANLSSVLQSLEKKEPQNKEHANPPNNEKKTPPLKEALQMNAIKRDKTLSKKKPEKTPIHAKTQTIAPSATPENAPKIPLKTLPLMPLIGANPPPNDNAPTPLEKEEKTKEISDNKEKAKETNSSAQSVQNTQASDKTSDNKSTTPKETIRHFTQQLKQEIQEY-KPPMSKISMDLFPKELGKVEVTIQKVGKNLKVSVISHNNSLQTFLDNQQDLKNSLNALGFEGVDLSFSQDSSKEQQAPKDQPKEPFKEQELTPLKENAL----KSYQENTDHENQETSMQITLYA |
| 4Q6O Chain:A ((21-437)) | MIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHYS-VLKGLVEVVPVLNKPSMLRNH-RGLYGDMNRKFAALDKN-------------DPEYPTIQEIKSLIAKPSI---DAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEVK-GAKFPNLLAFANNTIESINAHLLHPIEEYHLKNTRTAQGDTEMQKALTFYAINQ----------KKSAFANEASKELPLASRVFYHLQAIEGLLNQL-----------NIP-----------------FKRDFDLN-----PNSVHALIND--------KNLWAKISSLPKMPLFNLRPKLN---HFPLPHNTKIPQIP--------IESNAY----------------------IVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMD-NIRANVIGF-----------SVSNENKPNEAGYTIKFKDFQ--KRFSLDKQERIYRIEFYKNNAFSGMILVKFV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 284192 for 3398 contacts (83.6/contact) +
2D Compatibility (PS) -40967 + (NN) -7397 + (LL) 4652
1D Compatibility (HY) -11200 + (ID) 3900
Total energy: 225380.0 ( 66.33 by residue)
QMean score : 0.039
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