Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKTETYPRLLADIGGTNARFGLEVAPRQI-EC-VEVLRC--E----DFESL----SDAVRFYLSKCKESLKLHPIYGSFAVATPIMGDFVQMTN-NHW---------T-FSIET-TRQCLN------LKKLLVINDFVAQAYAISAMQENDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSD-GSLKVLPGEGGHVSFAPF-DDLEIL------------VWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGLE-------------------KVAKL-----SKAELTPQIISER---------ALNGDYPICRLTLDTFCSMLGTLAADVALTLG------ARGG--VYLCGGIIPRFIDYFKTSPFRARFETKGRMGAFLASIPVHVVMKKTPGLDGAGIALENYLLHDRI |
| 3HM8 Chain:A ((55-439)) | --GSERGDFLALDLGGTNFRVLLVRVT-TGVQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGL--SGQSLPLGFTFSFPCRQLGLDQGILLNWTKGFKASDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED--------------PRCEIGLIVGTGTNACYMEELRNVAGV---PGDSGRMCINMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLTSLGVLFRGQQIQRLQTRDIFKTKFLSEIESDSLALRQVRAILEDLGLPLTSDDAL-MVLEVCQAVSQRAAQLCGAGVAAVVEKIRENRGLEEL-AVSVGVDGTLYKLHPR-FSS-LVAATVREL--APR--CVVTF--LQSEDGSGKGAALVTAVACRLAQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148992 for 2421 contacts (-61.5/contact) +
2D Compatibility (PS) -31793 + (NN) -7433 + (LL) 1956
1D Compatibility (HY) -2800 + (ID) 2500
Total energy: -191562.0 ( -79.13 by residue)
QMean score : 0.344
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