Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKSAIFVLSGFLAFLLYALLLYGLLLERHNKEAEKILLDLNKKDEQAIDLNLEDLPSEKKNEKIEKVTEKQGDFLEPKEEPKEEPEESLEDIFSSLNDFQEKTDKNAQKDEQKNEQEEQRRLREQQRLKQNQENQEMLKGLQQNLNQFTQKLESVKNKTLDLQIPKQDGVDEKAYQEWYAQIYQILYKGWRGVFYHK-ASVSVLIMITKDGEF-DYTILSYSDFKDYNKSVMTLLDDLKKVDFPPYPGG----NMISIKVNFTTKEEQ |
1TOL Chain:A ((125-215)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGADINNYAGQIKSAIESKFYDASSYAGKTCTLRIKLAPDGMLLDI--KPEGGDPALCQAALAAA-KLA--KIPKPPSQAVYEVFKNAPLDFKPAAA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TOL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57265 for 558 contacts (-102.6/contact) +
2D Compatibility (PS) -9489 + (NN) -6853 + (LL) 13116
1D Compatibility (HY) 0 + (ID) 500
Total energy: -60991.0 ( -109.30 by residue)
QMean score : 0.558
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