Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPHINAKIGDFYPQCLLCGDPLRVSYIAKNFLQDAKEITNVRNMLGFSGKYKGKGISLMGHGMGIASCTIYVTELIKTYQVKELLRIGTCGAISPKVGLKDIVMATGASTDSKTNRVRFLNHDLSATPDFELSLRAYQTAKRLGIDLKIGNVFSSDFFYSFETHAFGLMAQYNHLAIEMEAAGLYATAMELNAKALCLCSVSDHLITKEALSPKERIESFDNMITLALEMMS
1PR5 Chain:B ((3-231))
-TPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIR----TTAAERQTTFNDMIKIALESVL
General information:
TITO was launched using:
RESULT:
Template:
1PR5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -191657 for 1963 contacts (-97.6/contact) +
2D Compatibility (PS) -23466 + (NN) -4748 + (LL) 572
1D Compatibility (HY) -24000 + (ID) 6100
Total energy: -249399.0 ( -127.05 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_1PR5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PR5-query.scw
PDB file :
Tito_Scwrl_1PR5.pdb
: