Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MREIVWVHSQRIAPYKTLILN---ELHYYP---------------LESDLTPFNALIFTSKNAVFSLLETLNNSPK--LKMLQNIPAYALSEPTAKTLQDHHFKTAFIGKKAHGKEFAKEILPLLEKKSVLYLRAKEIASSLDTILLEHGINLQQAVVYENKLKHLTLSE-QNALKPQEKSVLIFTAISHAKAFLHYF--------EFLKSYTAISIGNTTAHYLQEQGIQ-SYTAQKPSLESCLELALNLKS---- |
| 1WD7 Chain:A ((8-261)) | AVRVAYAGLRRKEAFKALAEKLGFTPLLFPVQATEKVPVPEYRDQVRALAQGVDLFLATTGVGVRDLLEAGKALGLDLEGPLAKAFRLARGAKAARALKEAGLPPHAVGDG-TSKSLLPLLPQ--GRGVAALQLYGKPLPLLENALAERGYRVLPLMPYRHLPDPEGILRLEEALLRGEVDALAFVAAIQVEFLFEGAKDPKALREALNTRVKALAVGRVTADALREWGVKPFYVDETERLGSLLQGFKRALQKEVA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141829 for 1785 contacts (-79.5/contact) +
2D Compatibility (PS) -23652 + (NN) -6068 + (LL) 496
1D Compatibility (HY) -2800 + (ID) 1850
Total energy: -175703.0 ( -98.43 by residue)
QMean score : 0.543
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