Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVSQYLYQNAQSIWGDCISHPFVQGIGRGTLERDKFRFYIIQDYLFLLEYAKVFALGVVKACDEAVMREFSNAIQDILNNEMSIHNHYIRELQITQKELQNACPTLANKSYTSYMLAEGFKGSIKEVAVAVLACGWSYLVIAQNLSQIPNALEDAFYGHWIKGYSSKEFQACVTWNINLLDSLALASSKQEIEKLKEIFIATSEYEYQFWDMAYQS
3IBX Chain:A ((1-216))
MQVSQYLYQNAQSIWGDCISHPFVQGIGRGTLERDKFRFYIIQDYLYLLEYAKVFALGVVKACDEAVMREFSNAIQDILNNEMSIHNHYIRELQITQKELQNACPTLANKSYTSYMLAEGFKGSIKEVAAAVLSCGWSYLVIAQNLSQIPNALEHAFYGHWIKGYSSKEFQACVNWNINLLDSLTLASSKQEIEKLKEIFITTSEYEYLFWDMAYQS
General information:
TITO was launched using:
RESULT:
Template:
3IBX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156146 for 1674 contacts (-93.3/contact) +
2D Compatibility (PS) -22541 + (NN) -4457 + (LL) 0
1D Compatibility (HY) -34800 + (ID) 10400
Total energy: -228344.0 ( -136.41 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_3IBX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IBX-query.scw
PDB file :
Tito_Scwrl_3IBX.pdb
: