Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------MLKKITHQIKAL-----------SELVALEHTIFSSMFLLMAMVISSYQKNQTLFFGLETLILCFLALLGARNFAMGFN----RLVD------RDIDK--DNPRTKNR--PSVDGRISV---KGMVIFSV---SNALLFVG-----VSYFI-----NPLAFKLSLPFLIILGG----YSYFKRFSSLAHFVVGLALGLAP------------------------IAGSVAVLGDIPLWNVFLALGVMLWVAGFDLLYSLQDMEFDKERG---LFSIPSQLGEKWCLNLSRLSHLVALIC---WLCFVKCYHGGLFAYLGLGVSALILLYEQILVARDYKNIPKAFFVSNGYLGVVFFIFI--------VLDVGFKHA--------- |
| 3ACP Chain:A ((1-417)) | MTKTITVAHIQYDFKAVLEENDENDDEFYINVDKNLNEIKEHKIVVLGNSRGVDAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS--GVITVHNVFSKEQTIQLPSKFTC--SCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDEVSQFCYVSDDESNGEVLEVGKNNFCALYNLSNP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ACP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238811 for 2136 contacts (-111.8/contact) +
2D Compatibility (PS) -30796 + (NN) 11849 + (LL) 636
1D Compatibility (HY) -8400 + (ID) 3200
Total energy: -268722.0 ( -125.81 by residue)
QMean score : 0.076
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