Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVVAKKSLGQHFLMDESFLDRIVNALPPLNSLRLIEIGVGLGDLTLKLLDRYP-LKTYEIDSNLCEKMRARLRAEKKPFQLELVEKDALF-LKEEEPYFLISNLPYYIATRLVLNALKDP-KCRGLLVMTQKEVALKFCAKDSQN---ALSVLAHTIGNATLLFDVPPSAFSPPPKVFSSVFEVIKEPLKEKALASLAQAPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLKKSVSYKE--------------------KLDKVLDFLALENQPTSVRASEVK--DYLKLLKSVLKG |
2H1R Chain:A ((2-270)) | ----------HLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEG-YNNLEV----AIKTVF-PKFDVCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGDSNYSRLTINVKLFCKVTKVCNVNRSSFNPPPKVDSVIVKLIPKESSF----------------LTNFDEWDNLLRICFSRKRKTLHAIFKRNAVLNMLEHNYKNWCTLNKQVPVNFPFKKYCLDVLEHLDM-CEKRSINLDENDFLKLLLEFNKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H1R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120245 for 1780 contacts (-67.6/contact) +
2D Compatibility (PS) -25818 + (NN) -20153 + (LL) 3008
1D Compatibility (HY) -20000 + (ID) 3450
Total energy: -186658.0 ( -104.86 by residue)
QMean score : 0.498
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