Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLDERLKMMQLATKSFKNVECVAFEGLLADLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIYPFISKV
1H1T Chain:B ((3-151))
--KRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAK
General information:
TITO was launched using:
RESULT:
Template:
1H1T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112764 for 1152 contacts (-97.9/contact) +
2D Compatibility (PS) -15818 + (NN) -3581 + (LL) 328
1D Compatibility (HY) -15600 + (ID) 3600
Total energy: -151035.0 ( -131.11 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_1H1T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H1T-query.scw
PDB file :
Tito_Scwrl_1H1T.pdb
: