Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIGLVKESMDLESRVALVPDDVALIAQKGVEVLVQNSAGANSGYSNEAYESVGAKIVDS-KTAWGQ-DLVVKCKEPLEHEYPLLKEKATLFSYLDLAYQKSLCEMFINKKITSICTETIAGPKNDYPILAPMSVVAGRLAAHLVQHYLLALEHVKGFMGKGVMLGGLSGAQRAKIVVIGGGVVGMESAKVLSQMGAKVTILELDYAKLQ----------NHPYYHLYDLEVLSVNEANIIQALNGAVGLVGAVLVTASQTPKVILRRHLKYMQKQGVVIDVACDLGGCIETIRQTSHSNPVYVEEDLLHYGVPNMPGIVAKTSSTAYSHASVPYLLYYLEHGLKGFLTANTKIVANTLGGLSAYNGYITQEGIAKAFNLAFKSPLEILKEL |
| 2VHW Chain:F ((1-370)) | MRVGIPTETKNNEFRVAITPAGVAELTRRGHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWADADLLLKVKEPIAAEYGRLRHGQILFTFLHLAASRACTDALLDSGTTSIAYETVQTADGALPLLAPMSEVAGRLAAQVGAYHLMRTQG-----GRGVLMGGVPGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEG-AVKRADLV---------IGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNATMPYVLELADHGWRAACRSNPALAK----GLSTHEGALLSERVATDLGVPFTEPASVLAHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VHW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -285413 for 3268 contacts (-87.3/contact) +
2D Compatibility (PS) -38283 + (NN) -10281 + (LL) 1104
1D Compatibility (HY) -25600 + (ID) 6500
Total energy: -364973.0 ( -111.68 by residue)
QMean score : 0.448
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