Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFGLNIDHIVTLREVRKTYEPEILEALFIAKNTHKVDLITIHLREDKRHIQNEDVLRLLEISPLPINIECSINAEITDFLCSLKNKPSKVTIVPENRNEVTTEGGLDCSLK--GLEEVIRAYHNKGIEVSLFVDPLKDALHFAKEHQVKQVEFHTGVYANLHNALYSNANNQIHAISTLKDKCPKELKEELHNAFLQLRRMSKEAFF---MGIVVCAGHGLNYSNVKELLKIPSLRELNIGHSVVSKAVLVGLEKAILEMAQLIKR
1IXO Chain:D ((5-237))
--LGVNIDHIATLRNARGTAYPDPVQAAFIAEQA-GADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEM--LAIAVETKPHFCCLVPE-------EGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYADA--------------------KTDAEQAQELA-------RIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAIIGRAVMTGLKDAVAEMKRLMLE
General information:
TITO was launched using:
RESULT:
Template:
1IXO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166707 for 1937 contacts (-86.1/contact) +
2D Compatibility (PS) -24396 + (NN) -15729 + (LL) 2592
1D Compatibility (HY) -14800 + (ID) 4650
Total energy: -223690.0 ( -115.48 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_1IXO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IXO-query.scw
PDB file :
Tito_Scwrl_1IXO.pdb
: