Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRKKGIILVLSVILIFSIGLLVNNLMTNNKDTAKPKKKTVAAVKKKKETPPKPKEPFNIDFTGDIMFDWDLRPVL-A-EKGMDYPFNNVREELKSSDYTFVDLETAITTRTKKVPYQEF-WIKSDPSSLTALKNAGVDMVNISNNHILDYYEDGLLDTTAALRANNLAYVGAGKNEDE------AYQL-KVADIKGNKVGFMSFCHFFPNTGWIADEDTPGVTNGYDLNLVEEKIKEERAKNKDIDYMVVYFHWGVEKTNTPVDYQTQYVKKLVDDNLVDAIVASHPHWLQGFEVYKDVPIAYSLGNFLFPDYVSGHSAETGIYKLNFDQGKVTAHFDPGIISGNQINMLEGSSKTAQLNYLQSISPNATINSNGDISAK |
| 2Z1A Chain:A ((28-245)) | --------------------------------------------------------FTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWA--RAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRLRYRAMALG-NHEFDLGPGPLADFL---KGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDT-REISNP--GPTVAFLDPYESAQKAVYE-L-LAKGVNKIVVLSHLGYGED-------LKLARRL--VG-VQVIVGGHSHTLLGS--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61243 for 1715 contacts (-35.7/contact) +
2D Compatibility (PS) -21633 + (NN) -1938 + (LL) 8844
1D Compatibility (HY) -4000 + (ID) 1550
Total energy: -81520.0 ( -47.53 by residue)
QMean score : 0.358
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