Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LDIQESVIGIDLGGTKILIGEVTKDGEVLNSKSYPSNTENQTKATETLLKVLADYTQNIGFIAPKQTGIGVGLVGRVDHKSGVW-LEIEPG-KSNPTPLAGILEAKTGLPVSLGNDVVCATMAEKQFGWGRETNDFIYLNVGTGLAAGFVVDGRITQGGHFNAGEVGHAVVDIHSDVLCGCGRRGCVERLASGLGIKEEALRHLNSYPTSILAETQTELTGKMVLHAAEQKDELAEKIIDNATFQLANLIMNLVRTTDPECVILGGGVTRNEHFFQKIQDNLQSNTIRFVTKGVVRSKLEKDKVGLIGAAVIGMRLGNEGGKE |
2AA4 Chain:A ((1-288)) | ----MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPE---ALRDALSALVSPL---QAHAQRVAIASTGIIRDGSLLALNPHNLGGLL-HFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALD-GDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADP-HGPVCGCGRTGCVEAIASGRGIAAAAQGELA------------GADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQEPA-AFHVDLLAAHYR-HDAGLLGAALLAQG-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149159 for 2523 contacts (-59.1/contact) +
2D Compatibility (PS) -30837 + (NN) -15242 + (LL) 1496
1D Compatibility (HY) -10800 + (ID) 4050
Total energy: -208592.0 ( -82.68 by residue)
QMean score : 0.491
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