Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPTMMTYINEEEEMCRAILANFQTNAEKLESLVKNGAKEWLILATGSSLNAAQSAKYYIENIADVRITVEEPFNHLYYE-KLSNHLDLVIGISQSGQSTSTISALERVKKEASVPVVALTSDVTSEIAEFADITLDIGSGKERVGYVTKGFTATVLTLMLTGLHFAYKTAQIDETKFNNEINAFSRATNAIPATIAETEAFYERWQEEFATAPKFTAIGYGPTVGTCKEFETKFSETVRVPSQGLDLEAFMHGPYLEVNPQHRIFFLETESAVTERLVALRNYESKYTPFTYTVKFGTAGNDRTLLIPADLDEYQAPFLMILPFQILAHHIAELKGNKLTERIYTDFGVAMKSKTKPGDYA |
| 3G68 Chain:A ((1-345)) | -GMTIQDYMLETPVRMREIISNADSLFNEV--KRT-NLKKIIITGSGTSYHSGVQVQPYLQNLLDIDVVKMYPFMITEDTFKFDNENTLVVGVSQGGSSYSTYNAMKLAE-DKGCKIASMAGCKNALIDEISDYILTVNCGEEKSGAKTKGYYCTKLNLMLLGLQIAREKGIISSEKYNEEINKILDAINRFEAVYKLSKQWIERNKEKLVNSKEIRIIGHSDIYGDTLEAALKLLETMRIPVTGYEFEEFIHGIYNAINSDSTIFILDTGK--EPRVTKMIDVLSGWTENVFAIGRDVTENDKNLKIDITDNPYYQTFNFIVPIQLICGEIPTLRGVDPSVPKDTRFHMKL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G68.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165175 for 3023 contacts (-54.6/contact) +
2D Compatibility (PS) -36935 + (NN) -11895 + (LL) 668
1D Compatibility (HY) -20400 + (ID) 4700
Total energy: -238437.0 ( -78.87 by residue)
QMean score : 0.443
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