Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LSNFTAKVPLSERMADVLISKDRWKDDEEGYLKV-KYGLEIILINVMKFALVYG--IALVTGLLLQTVTVHLSYLWLRRYSFGLHATKTLNCTLISLLMFVLAPFVFQNIPSNNWIVLGTFGFILLNMFLFAPADTESLPLIGEEHRKTLKRKAMIGTLILTGIALLIPFAEMKTLIMVGSLFQVISINPLTYKLLKRRYRNYEKYE
4RFS Chain:S ((3-200))
-RHKTFRLVVDALLMAIVLLQNL--VPFLGYIPFGPFSMTLIGLTVIVAGSALGPRDGLLIGGFWGLITFVRAFTWPSSPVAPLIFTNPLISILPRLLMGLVAGSLYLWGRHRQWSMRQAMQVAAGCAALTNTVLVLGLVFLFYQTPAVL-GYVLMISLFTNGIPELILDVLVAPLI----------AMPLRRQWERLKPQ------
General information:
TITO was launched using:
RESULT:
Template:
4RFS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166882 for 1491 contacts (-111.9/contact) +
2D Compatibility (PS) -18836 + (NN) -2924 + (LL) 1832
1D Compatibility (HY) -9600 + (ID) 1550
Total energy: -197960.0 ( -132.77 by residue)
QMean score : 0.273
(partial model without unconserved sides chains):
PDB file :
Tito_4RFS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RFS-query.scw
PDB file :
Tito_Scwrl_4RFS.pdb
: