Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEYRLNEDVQLYVSNLTYRIKRSEEEALVEMPMGILLYDEHYKIEWVNPFMSKYFDKAELIGESLEEVGPEFLDVITGNDEKGIMSIAWRDHRFDTIVKRKERILYLYDRTEYYDLNKKFQANKSVFAVIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKRLEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEDDLIQLADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKRTRVRARVISQALQELITQSDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDR-----------NAYVVVEP----GKMSPDVKRLMNEIEEYPNVIKNIVTPQVALEN-----ITEKSLLVVVDTHKPSMVINKELLDSATNVVVVDHHRRSEEFVGSPVLVYIEPYASSTAELITELFEYQPD-LEQVGKIEATALLSGIVVDTKNFTLRTGSRTFDAASYLRSL-----------GA-DTILVQ-QFL--KEDITTFTQRSRLVESLEIYH--D------GMAIATGHE---DEEF---GTVIAAQAADTMLSMEGVQASFVITLRPDKLIGISARSLGQINVQVIMEKLGGGGHLSNAATQLKDVTIAEAEKQLISAIDAYWKGET |
| 2QB7 Chain:A ((26-324)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NDVLTICVGNESADMDSIASAITYSYCQYIYNEGTYSEEKKKGSFIVPIIDIPREDLSLRRDVMYVLEKLKIKE---EELFFIEDLKSLKQNVSQGTELNSYLVDNNDTPKNLK-N-Y-IDNVVGIIDHHFDLQKHLD-AEPRIVKV-SGSCSSLVFNYWYEKLQGDREVVMNIAPLLMGAILIDTSNMRRKVEESDKLAIERCQAVLSGAVNEVSAQGLEDSSEFYKEIKSRKNDIKGFSVSDILKKDYKQFNFQGKGHKGLEIGLSSIVKRMSWLFNEHGGEADFVNQCRRFQAERGLDVLVLLT--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95312 for 2018 contacts (-47.2/contact) +
2D Compatibility (PS) -26878 + (NN) -8630 + (LL) 33176
1D Compatibility (HY) -9200 + (ID) 1700
Total energy: -108544.0 ( -53.79 by residue)
QMean score : 0.494
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