Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKVKWSILLFLVLAIFLSAGITYLALNQSSNKESKNNSEKTHKMTIALVNEDQGDNFQGKQVEFGNQFVKSIEK-DDTHEWYVVSRGVAESGLKRDVYNMMIVIPSDFSEKAMSMTSSAPEKVTISYKVNDVGNSDLKAEAEKTAASVLEDFNSRIIDVYFASILTTLQEAQDNIGTLVKEEKKYDAIYNKDVNNPL-SSYTKQFKTVQDYTGTSKESFQGFQDIMKEFEESLNLSQKENEEHMKNMDAYTKTQEENAPFGAEFTENLSKFDGTLSAEDIRMQTAALEQVNAKMTSEFQILENSNSLLSQTQALQSYIAETNARIDAVDAEIMGTLENDFRTAVYNDLLRILQENEYSDKLNEIGLKDLTGEDINAGFNKMIVKEIQSLPTYNADQLASIGLDEEMYKNVVTLSKEYYSNHRGAFSEGFSFTTDPKTLPTDTLKSDTINRLKSEGVALESSSYTVEGSDYPTEIILTLDENFTFSDVDCLVNGSSNPELVQQNAYGENGIKLSIQALGSTPAEIKITGKAKLREGVNVPLIGAVNWNATLQQYEKKEYSEMPTIPSELDPTTPDTSLIVRKEPVPIKVTAPTYLNETKSSVKAITNTVKDYYKLQALFDLYYGIDASDSGQIPDFSNYQVTLENSAKASSYYYIFNKEDVIGSFVNLTTDRFVADYTKKIKAFEKRIDDYKNTMAEANSRSEDVTNRLNETTQEAINLNTNLALTLQNLESWREESKGLIEENGVVLEKSGEEATMALQLSSEFAGLLAESESLAGTSEGNLKSAEVVYKTFDAIDKEAKNIQQSGETLVKEASTLSDDLSEKLEDDETFQKNFAKVMENSRVGDRQNENLYSFLSSPVDKMNAGTIVAGDKSMPYFMILICTILAIFTSYVISHQEKKREQLNEFEKEMSLVFKNIPITFLAICVGIIEGLIIGAISGFIFEVGEIGMFLWIGVCVLIMMTLVTAFSYLLRQFNMIGMSIILLVLSLYLFLTDAVGLNIDNESIFATFRTFSPLQYMEYLLNGILSAQKDYIIVVYSLIGATVVFTGLNLFVWHRSKEKVEEDDSDEI |
3CNI Chain:A ((11-155)) | --------------------------------------------QKVAIVREDTG--------TIAELAEKALGNMV-DIVYAGSDLKEAEEAVKKEKAPAIIVIPKGFSQSLES-----GEKARLEIVWYLRGTGLSEAVSTGTISSLIESLKVQLASFLLNDPKKA--QLLFDPLEIVQHTYLRGSLFKNHSPEAIMNVFYSQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CNI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22002 for 1083 contacts (-20.3/contact) +
2D Compatibility (PS) -15195 + (NN) -3502 + (LL) 64932
1D Compatibility (HY) -3200 + (ID) 1250
Total energy: 19783.0 ( 18.27 by residue)
QMean score : 0.371
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