Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAKNTHMNVTVDFTNWGASKYDLRIPVHQPIKALIINLAETLKIDYKDLSKCTIKTTNKAILLSDDDKLTNFQIADGDILEIL
2IO1 Chain:B ((15-85))
----DHINLKVAGQD--GSVVQFKIKRHTPLSKLMKAYCERQGLS-----MRQIRFRFDGQPINETDTPAQLEMEDEDTIDV-
General information:
TITO was launched using:
RESULT:
Template:
2IO1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42425 for 466 contacts (-91.0/contact) +
2D Compatibility (PS) -7636 + (NN) -3927 + (LL) 692
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -57146.0 ( -122.63 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_2IO1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IO1-query.scw
PDB file :
Tito_Scwrl_2IO1.pdb
: