Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VITNQRDIDKYYDMLVEKNSNYEGVFFVGVKTTGILCRPTCPAKKPLKENCEFFSTAKEALLASYRPCKRCEPLSNPTKLSPAVKLLVDAIEKNPEKKWTDKDFDDLSISANTARRQFKKQFGMTFIEYARSRRLGLAFKHIRGGNSIINAQLDSGYESGNGFRDAFSKTMGEVPHKSKDITILYSAWLETKLGSMLAISDDDSLLLLEFVDRKGLETEIKKLRMRLNAAITPEKTIIIQQIEAELAQYFNGELI--DFKTPI-RY---IGSDFQEN-VWEELRRIPIGETISYKGLAEKLGRSTASRAVARANGANQLSLIVPCHRVINTNGALGGYGGGLARKEWLIKHEKMVPK |
1EH6 Chain:A ((5-176)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CEMKRTTLDSPLGKLELSGCEQGLHEIKLLG-----------EVPAPAA-VLGGPEPLMQCTAWLNAYFHQPEAIEEFPVPALHHPVFQQESFTRQVLWKLLKVVKFGEVISYQQLAALAGNPKAARAVGGAMRGNPVPILIPCHRVVCSSGAVGNYSGGLAVKEWLLAHEGHRL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EH6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63943 for 1158 contacts (-55.2/contact) +
2D Compatibility (PS) -16841 + (NN) -5195 + (LL) 11320
1D Compatibility (HY) -8000 + (ID) 2450
Total energy: -85109.0 ( -73.50 by residue)
QMean score : 0.468
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