Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSSIDQARKTIKALNSTYKIVHVTELATLGKLSALREKAEAAVSYYETILKSLRWVR---KTMYTSNNQIKEEKNVTAIAITSERGLCGAYNSEVFAEIDQLIESLGD-QVTINWVVVGEQGHRYLTKLGQNITSYLQFSLENIDLETTTAVTADFIDLIHSEQMDALYVIFTKYLNAVQSEAMCEKIYPEIPEDSDTE-LIEVDYVLDFETDDEQVEQLLLENYLCGLLYSMFRYSVASEYCMRRIAMKQAKDNIQKQLEEAIFDARKQALQQKTGELLDIISGAQTIRKDEE |
| 1FS0 Chain:G ((19-248)) | ------------------KITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHYKHPYLED----RDVKRVGYLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTMSQVPTISQLLPLP-------KHKSWDYL--YEPDPKALLDTLLRRYVESQVYQGVVENLASEQAARMVAMK-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FS0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136024 for 1630 contacts (-83.5/contact) +
2D Compatibility (PS) -22314 + (NN) -3632 + (LL) 5360
1D Compatibility (HY) -12400 + (ID) 2350
Total energy: -171360.0 ( -105.13 by residue)
QMean score : 0.588
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