Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MTFLEFHQLVKEDLLIYSWIIKNFHLTRQKLMAGGEITMNREQVIVMEKGLLVQVNEEGKNDLYRVFIDQRIIFTTKGDITLTALEDTSYSIIRTDELIGKLEDQHLLPTFFLQIAEDFEKGLDWQRTLISVDPAERAEMILVKIIERYEINSENKPEFPRWLRI--NVLARFAKCSVSTMSSVVNELVNEGDLNIKGTPWLLTRPYQASCA--
1FT9 Chain:A ((2-213))
PPRFNIANVLLSPDGETFFRGFRSKIHAKGSLVCTGEG---DENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFCMHSGCLVEATERTEVRFADIRTFEQKLQTC---PSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQTGVIVSVDFTVEEIANLIGSSRQTTSTALNSLIKEGYISRQGRGHYTIPNLVRLKAAA
General information:
TITO was launched using:
RESULT:
Template:
1FT9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82752 for 1421 contacts (-58.2/contact) +
2D Compatibility (PS) -22072 + (NN) -6150 + (LL) 860
1D Compatibility (HY) -4400 + (ID) 1300
Total energy: -115814.0 ( -81.50 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_1FT9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FT9-query.scw
PDB file :
Tito_Scwrl_1FT9.pdb
: