Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LVQSINTKVDLTIDATAYTGLTDYGKIMIGDKGFEFFNSRDVR-KFVQIPWEEVDQVIVSVMLKGKWIPRYAIKTKR--NGTYTFASKR---PKEVLRKIRVYVDPANMVSSLSFFDVMKRSFRSIFSKKKNKNK
2I1J Chain:A ((218-380))
--------------------------LGVDALGLNIYEKDDKLTPKIGFPWSEIRNISFN----DR---KFIIKPIDKKAPDFVFFAPRVRVNKRILALCMGNH-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2I1J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33959 for 367 contacts (-92.5/contact) +
2D Compatibility (PS) -6940 + (NN) -2274 + (LL) 4216
1D Compatibility (HY) -4400 + (ID) 550
Total energy: -43907.0 ( -119.64 by residue)
QMean score : 0.755
(partial model without unconserved sides chains):
PDB file :
Tito_2I1J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I1J-query.scw
PDB file :
Tito_Scwrl_2I1J.pdb
: