Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKIVKMSEKNEHGTLEQFYPETHAEAVKGLVSVSEEEKTIWDQKESTAGAEQKANTALNSAKDYVDTIGEGTVIFKGANLMGAGQSFKWDASKLKFGMTLLFSRYDAANNTPQDYYYHSVFLSKAQLVELAGKGILVQMPSTTYGDRKYLYVSTTGLSGHFDNSNYAAWALRQVTIM |
2K6I Chain:A ((1-47)) | -------------------MGVSVMEAIKEVK--LAEEQAVKEIEEAKNRAEQIKAEAIEEAKKLIAC-------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K6I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11072 for 180 contacts (61.5/contact) +
2D Compatibility (PS) -4918 + (NN) 386 + (LL) 8648
1D Compatibility (HY) -2000 + (ID) 600
Total energy: 12588.0 ( 69.93 by residue)
QMean score : 0.469
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