Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPTKNHRLPKKHLPIRKSTTRFTKGVVTVSRIDIGEIQTFAYQLHTANEAARKSIKDIKNAVKNYTEDGSLKGKAIDA--SKNYYQMTYFPLCDAIIEAMNESEERLAQYIADFHAQVDSSADARIDADGLYELGKMIDRIEAKKEALAQRMNTGTEGQMQSYRSQLSIAYKQENILEKYLAFEQSHGGFFDNLTDLVRGIQQTIRELQSNIQFNSKTGTYDMSKLNFTTVTRMQNASGKALNDNAKTFNFDEYQKTYRGQMWVLMKNGIVDVEATNAYNAAVLGGEMPHESNEAQEEAELLQAVVQSVKEGTDPVTGQEISKAQGFGIISGLIFRYTAGGYKG----KKFKIPRDWLHRRKKNNGVEVGTDFGK-IGKLVNHPNIKINWSEYAEHGMSR-LKQRGLSKSQVDDFVEHGKVLSQNEGEKFAFITEDGVAIVSKDGKLVTAWGKKDFDEGMKKIIGKLYGK--- |
| 4R6H Chain:A ((28-421)) | -----ADTAKKTLTIYSTMS---------TDSERDTFRKLAAAFEKEHSDIHVSLHFPGNDYENMMRVRMAANDLPDLFDTHGWGKIRYGEYTADL---------RDMKWTQDLDPNLNSILKNKSGKVYAYPINQAKDGL-AYNRNILDRYGIAPPETMDDFIKALRTIKEKSKGSIVPFWFAGYDKSSFAQYYDQFATPLL-ITDPAHNEKKQLINGTFQWSKFTYLSEILKQMQKEKLINIDAVTAK----------------KSQLIELMAQNKIAFTMQGGTLGQDVAQINPNVKVGIIPTPAIHPGDDPI------------WIGGE--RYTLAAWKDSPQLKEAKDFIAFMARPANAKQMAEATSLPSGLTNVKADIFYANDYEYYQDVKVEPYFDRLYLPNGMWDVLGTVGQELAADI------------------------LAPQDISQKLGREYKRLREQSET |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 56234 for 3164 contacts (17.8/contact) +
2D Compatibility (PS) -38844 + (NN) 6908 + (LL) 5892
1D Compatibility (HY) -9600 + (ID) 2900
Total energy: 17690.0 ( 5.59 by residue)
QMean score : 0.182
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