Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LNIMIALIPALLWGTVPLIITKFGGSTRQQTMGMTLGALTFAVIVFFFTDPVYTLKTVGISFITGCLWTVGQMFQLQAFKIIGVSKAMPISTGMQLVGTTLCGVILFHEWDTTLRIILGFIALALIVGGIFLTSYAEKEEDGTNALKQGLITLFISACGYVGLVVLIQGFKIDGINAILPQAIGMVISALIMTHSGGTEKRFNKRTLLLTIPGVIWAAGNVAMVHANQLVGVATGFSLSQLGVVISTIGGIILLKEKKTQKEMLFVIVGVVLVVLGGILIGVAKGA |
| 3NSW Chain:A ((1-106)) | ---------------------------------GSHMEYCPKMLSEIRQEDINDVETVAYVTVTG---KTARSYNLQYWRLYDVPKTAPSQWPSFGTLRDDCGNI---QLTADTDYVLGCKSGN---QDCFVKLHDGLSQKEKDLLKE------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85714 for 729 contacts (-117.6/contact) +
2D Compatibility (PS) -10608 + (NN) 4012 + (LL) 15452
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -79708.0 ( -109.34 by residue)
QMean score : 0.200
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