Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDASTSFAILPSNVKQKTAFERKVNQVKAASWTNNCLTGTLDIGQFSCYFVNEKIARVTVNPFGEVDLTPSIAAIHDNEKQAAKFTETNDCYELHFADKEVIVCKNPFQIIMKQAGKRIFQTEGLAINRDKEHQISIQSEPGTAIFGLGEKTGALNKAGSIISMWNTDVYSP-HNKDTVELYQSIPFMIADTAKTTYGLFYDNSHRTEFDFQSFEEMYT--VLAEGGQANLYIIFGEDVKEVVANYTDLTGKTPLPPKWSLGYHQSRYSYTSEEEVERIANTFKEKEIPLDCVFMDIHYMDDFRVFTFNPDTFPNGPELIARLREQNIDVVPIVDPGIKKDVDYSVYQEGIKNNYFCTKLEGSIYYGDVWPGVSAFPDFLSTTVQHWWGSLHKFYTDLGIRGIWNDMNEPSVFNESKTMD--------------------------LDVV----------HNLDGKNVTHKEAHNLYGLYMSKATFEGLKRLVPNERPFSLTRAGYAGVQRYSAVWTGDNRSHWEHLEMSLPMIMNLGLSGVAFTGADVGGFSSDCTKEMLIRWTQAGAFLPYFRNHCVQDSIYQEPWAFGADAEKI--VKQYIELRYAFLPYIYTEFQKTAESGLPLVRPLYMEFKDERDLIQVNDQFMLGENILVAPIVREGQAKRLVRLPKGLWFNYWTKEQFVGGDYI-----IADAPIDTMPIYIKAGTILPVGSSVQNTKETQELTLEVYLDSETATGYVYNDDGKSYQYESGAVSKTTLTATFKNGEVLINATHQGEANLQQKVTTIQVFGEKIDKITRAGI |
| 3NSX Chain:B ((53-657)) | ------------------------------------------------------------------------------------------------------------------------------------------------VYGLGESNRGINKRGYCYISNCTD--DPIHTEDKRSLYGAHNFIIV-SGKTTFGLFFDYPSKLTFDI-GYTRMDTLKVSCENADLDIYVIEGENAYDIVKQFRRVIGRSYIPPKFAFGFGQSRWGYTTKEDFRAVAKGYRENHIPIDMIYMDIDYMQDFKDFTVNEKNFPDFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVKNNYFCKREDGSDFVAAVWPGDTHFPDMLNPEARKWFGDKYRFLIDQGIEGFWNDMNEPAIFYSSEGLAEAKEFAGEFAKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDKVHNLFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMHRYGGIWMGANKSWWSHILLNLKMLPSLNMCGFMYTGADLGGFGDDTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQF----ENIEDFRSVINARYRLVPYLYSEYMKAALNDDMYFKPLGFVYPDDKMAIRVEDQLMLGNEIMIAPVYEQNARGRYVYLPEEMKFIKFMPDGSISEEVLEKGVHYVDVALNEVPLFIRSGKCIPVAEAAECVKDIDTENMQL-IGYEGSSYTLYEDDGIHKDYDK--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NSX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250065 for 4928 contacts (-50.7/contact) +
2D Compatibility (PS) -59650 + (NN) -22609 + (LL) 14348
1D Compatibility (HY) -53600 + (ID) 9950
Total energy: -381526.0 ( -77.42 by residue)
QMean score : 0.468
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