Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNISDIIEAYLKQVLESSEAVEIKRSEIADKFECVPSQINYVINTRFTMERGYIVESKRGGGGYIRIIKVKMNDKLQLLEAIISMVHDKKVSQSFSEDVILRLLEEEVITKKEARLMVAALDREVLILPLPDRDILRSRILEAMLVALKYD
1QGP Chain:A ((154-197))
---------------------KATTAHDLSGKLGTPKKEINRVLY-SLA-KKGKLQKE-AGTPPLWKI------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1QGP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16241 for 269 contacts (-60.4/contact) +
2D Compatibility (PS) -4437 + (NN) 1585 + (LL) 11364
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -9279.0 ( -34.49 by residue)
QMean score : 0.215
(partial model without unconserved sides chains):
PDB file :
Tito_1QGP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QGP-query.scw
PDB file :
Tito_Scwrl_1QGP.pdb
: