Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKGKKYQDALKQIDANKVYTAEEAVELAKKI----DFAKFDATVEVAFRLG-VDPKKADQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADYVGESEFVEKINQ------GWFDFDVIVATPDMMGEVGK-LGRVLGPKGLMPNPKTGTVTMDVTKAVNEIKAGKVEYRVDKAGNVHAAIGKVSFDAAKLVENFRTVNDVLQKAKPAAAKGTYVKNLSVTTTFGPGIKVDPASL
2NOQ Chain:G ((6-213))
----------------------VREHVKELLKYSNETKKRNFLETVELQVGLKNYDPQR-DKRFSGSLKLPNCPRPNMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHN--DDLYGKVTDVRS-TIKFQLKKVLCLAVAVGNVEMEEDVLVNQILMSVNFFVSLLKKNW--QNVGSLVVKSSMGPAFRL-----
General information:
TITO was launched using:
RESULT:
Template:
2NOQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75328 for 1489 contacts (-50.6/contact) +
2D Compatibility (PS) -21001 + (NN) -10497 + (LL) 1852
1D Compatibility (HY) -13200 + (ID) 2000
Total energy: -120174.0 ( -80.71 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_2NOQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NOQ-query.scw
PDB file :
Tito_Scwrl_2NOQ.pdb
: