Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VFIHGFQEEVGNLWQETLRHPFVRSLADGTLEKEAFYYYLLQDDYYLSHFEKVIEKSVEQAGTAELAAEMREVQVRLQQSELLMREQFYPRVGLTERDFSERKPAPTAYHYTSHLHRMVDFGSFGVTIAALLPCYALYADIGKMYEGAR--SSEPFYQELLDSYVDENYQKVVLQQKRLVEQAASMADARELALMKQAFQISVEMEWAFFDMAYKKQNWRGSVNYV
3IBX Chain:A ((2-216))
QVSQYLYQNAQSIWGDCISHPFVQGIGRGTLERDKFRFYIIQDYLYLLEYAKVFALGVVKACDEAVMREFSNAIQDILNNEMSIHNHYIRELQITQKELQNACPTLANKSYTSYMLAEGFKGSIKEVAAAVLSCGWSYLVIAQNLSQIPNALEHAFYGHWIKGYSSKEFQACVNWNINLLDSLTLASSKQEIEKLKEIFITTSEYEYLFWDMAYQ-----------
General information:
TITO was launched using:
RESULT:
Template:
3IBX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124191 for 1638 contacts (-75.8/contact) +
2D Compatibility (PS) -22955 + (NN) -8638 + (LL) 556
1D Compatibility (HY) -14800 + (ID) 2500
Total energy: -172528.0 ( -105.33 by residue)
QMean score : 0.690
(partial model without unconserved sides chains):
PDB file :
Tito_3IBX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IBX-query.scw
PDB file :
Tito_Scwrl_3IBX.pdb
: